A quick search gave me for example this one: https://genome.cshlp.org/content/26/1/36
i think these are more relevant examples
https://www.cs.cmu.edu/~ckingsf/software/sailfish/
https://www.nature.com/articles/nmeth.4197
alt Hacker News
i think these are more relevant examples
https://www.cs.cmu.edu/~ckingsf/software/sailfish/
https://www.nature.com/articles/nmeth.4197